![]() ![]() For example, Jmol is fully functional in Mozilla Firefox, Internet Explorer, Opera, Google Chrome, and Safari. Jmol requires Java installation and operates on a wide variety of platforms. Chime requires plug-in installation and Internet Explorer 6.0 or Firefox 2.0 on Microsoft Windows, or Netscape Communicator 4.8 on Mac OS 9. While Jmol has many features that Chime lacks, it does not claim to reproduce all Chime functions, most notably, the Sculpt mode. ![]() For example, by default a bond will inherit the two colors+translucencies of its. Negative values are multiples of the Jmol 11 default, which changes with viewing angle. Jmol currently supports many of the RasMol/Chime scripting commands. The spacing parameter also switches to multiple bonds in the plane of the double bond. The Jmol applet, among other abilities, offers an alternative to the Chime plug-in, which is no longer under active development. Jmol 12.1.11 adds the capability to adjust the spacing of the lines in a multiple bond and also the relative widths of the cylinders in multiple bonds vs. There is also a JavaScript-only ( HTML5) version, JSmol, that can be used on computers with no Java. Jmol supports a wide range of chemical file formats, including Protein Data Bank (pdb), Crystallographic Information File (cif), MDL Molfile (mol), and Chemical Markup Language (CML). A standalone application and a software development kit (SDK) exist that can be integrated into other Java applications, such as Bioclipse and Taverna.Ī popular feature is an applet that can be integrated into web pages to display molecules in a variety of ways.įor example, molecules can be displayed as ball-and-stick models, space-filling models, ribbon diagrams, etc. It is free and open-source software released under a GNU Lesser General Public License (LGPL) version 2.0. It is written in the programming language Java, so it can run on the operating systems Windows, macOS, Linux, and Unix, if Java is installed. Jmol returns a 3D representation of a molecule that may be used as a teaching tool, or for research e.g., in chemistry and biochemistry. Jmol is computer software for molecular modelling chemical structures in 3-dimensions. ives an indication of reaction progress,
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